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GRMZM2G164538


Description : rhomboid protein-related


Gene families : OG_42_0003310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G164538
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G157749 No alias rhomboid protein-related 0.02 Orthogroups_2024-Update
Glyma.02G064500 No alias rhomboid protein-related 0.02 Orthogroups_2024-Update
Potri.008G041100 No alias rhomboid protein-related 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013861 DUF1751_Mem_euk 67 165
No external refs found!