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  5. At1g47350

At1g47350


Description : F-box associated ubiquitination effector family protein [Source:UniProtKB/TrEMBL;Acc:F4HT76]


Gene families : OG_42_0000317 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g47350
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
At1g47765 No alias Putative F-box protein At1g47765... 0.03 Orthogroups_2024-Update
Brara.C00772.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E02227.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 280 400
No external refs found!