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  5. GRMZM2G168378

GRMZM2G168378


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G168378
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
101245 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
106861 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
462 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
74762 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
83339 No alias mitochondrial editing factor 22 0.02 Orthogroups_2024-Update
A4A49_36693 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
At3g47530 No alias Pentatricopeptide repeat-containing protein At3g47530... 0.02 Orthogroups_2024-Update
Bradi1g38705 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g47170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g56040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g13297 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g15830 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g53140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g62320 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g03440 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g48960 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g55520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g59950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g30190 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Brara.D01648.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F00971.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.01G159100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G043900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G071600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G201800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G008800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G206900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G159200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.07G173900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G086500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G168800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G006200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G005600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G239300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Orthogroups_2024-Update
Glyma.13G220450 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G059000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G272100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G026110.4 No alias RNA editing factor *(DOT4) 0.02 Orthogroups_2024-Update
HORVU5Hr1G066140.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G113330.1 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU5Hr1G120410.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g25280 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g24680 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g29360 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g06650 No alias tetratricopeptide-like helical, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g08140 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_10277392g0010 No alias (at4g18750 : 498.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
MA_110g0010 No alias (at4g02750 : 501.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
MA_185098g0010 No alias (at3g49170 : 649.0) embryo defective 2261 (EMB2261);... 0.02 Orthogroups_2024-Update
MA_483636g0010 No alias (at3g61170 : 684.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
MA_57048g0010 No alias (at3g09040 : 636.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00017626-RA No alias (at4g13650 : 693.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00018598-RA No alias (at1g11290 : 726.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00022741-RA No alias (at4g18750 : 598.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00036106-RA No alias (at4g02750 : 199.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00056424-RA No alias (at2g22070 : 461.0) pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
Potri.001G466066 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G239600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G146800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G044700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G152300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s103_35V6 No alias MZB10.7; pentatricopeptide (PPR) repeat-containing... 0.01 Orthogroups_2024-Update
Seita.1G263300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G311600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G001800.1 No alias RNA editing factor *(ELI1) 0.05 Orthogroups_2024-Update
Seita.2G068700.1 No alias RNA editing factor *(CRR28) 0.03 Orthogroups_2024-Update
Seita.2G247200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G373100.1 No alias RNA editing factor *(OTP90) 0.02 Orthogroups_2024-Update
Seita.3G137300.1 No alias RNA editing factor *(ECB2/VAC1) 0.03 Orthogroups_2024-Update
Seita.4G046800.1 No alias RNA editing factor *(MEF29) 0.01 Orthogroups_2024-Update
Seita.4G218400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G065900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G176900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G357300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G360300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G460300.1 No alias RNA editing factor *(OTP72) 0.02 Orthogroups_2024-Update
Seita.6G213800.1 No alias RNA editing factor *(DOT4) 0.03 Orthogroups_2024-Update
Seita.7G131800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.7G164600.1 No alias RNA editing factor *(MEF12) 0.03 Orthogroups_2024-Update
Seita.7G165500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G329200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G068200.1 No alias RNA editing factor *(DEK36) 0.04 Orthogroups_2024-Update
Seita.9G151300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G339400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G069300.2 No alias RNA editing factor *(DEK36) 0.05 Orthogroups_2024-Update
Sobic.001G149100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G151300.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.001G212200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G312700.1 No alias RNA editing factor *(MEF25) 0.04 Orthogroups_2024-Update
Sobic.001G347100.2 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.001G436600.3 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G513000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G111700.6 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G240900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G292300.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G358900.3 No alias RNA editing factor *(OTP90) 0.05 Orthogroups_2024-Update
Sobic.002G385200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G389200.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G030100.1 No alias RNA editing factor *(CWM1) 0.05 Orthogroups_2024-Update
Sobic.003G047400.1 No alias RNA editing factor *(OTP81) 0.05 Orthogroups_2024-Update
Sobic.003G142400.2 No alias RNA editing factor *(PGN) 0.06 Orthogroups_2024-Update
Sobic.003G237100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G277100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G333200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G051600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G053100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.004G141600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G174800.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G199400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G217900.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G266300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G290400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G312000.1 No alias RNA editing factor *(CLB19) 0.02 Orthogroups_2024-Update
Sobic.006G069100.3 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.006G146400.4 No alias RNA editing factor *(MEF12) 0.03 Orthogroups_2024-Update
Sobic.006G146900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G006800.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G137800.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G208400.1 No alias RNA editing factor *(REME1) 0.04 Orthogroups_2024-Update
Sobic.008G009000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G066900.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.008G147400.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G179000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.009G116400.4 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G136200.1 No alias RNA editing factor *(MEF32) 0.08 Orthogroups_2024-Update
Sobic.009G155400.3 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G238700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G241200.3 No alias RNA editing factor *(ECB2/VAC1) 0.05 Orthogroups_2024-Update
Sobic.009G250700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G066900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G067000.1 No alias RNA editing factor *(MEF29) 0.05 Orthogroups_2024-Update
Sobic.010G181000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G232700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.010G258600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g020340 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen02g024180 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen02g039140 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen03g003770 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen03g034990 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen03g038010 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen07g017190 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen09g031050 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen10g004380 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen11g006690 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen11g026910 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0030150 protein import into mitochondrial matrix IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
BP GO:0065002 intracellular protein transmembrane transport IEP Predicted GO
BP GO:0070585 protein localization to mitochondrion IEP Predicted GO
BP GO:0071806 protein transmembrane transport IEP Predicted GO
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 215 253
IPR002885 Pentatricopeptide_repeat 418 464
IPR002885 Pentatricopeptide_repeat 495 519
IPR002885 Pentatricopeptide_repeat 319 349
IPR002885 Pentatricopeptide_repeat 521 547
IPR002885 Pentatricopeptide_repeat 123 147
IPR002885 Pentatricopeptide_repeat 289 311
No external refs found!