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  5. GRMZM2G168412

GRMZM2G168412


Description : Radical SAM superfamily protein


Gene families : OG_42_0006167 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006167_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G168412
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
At2g39670 No alias Radical SAM superfamily protein... 0.02 Orthogroups_2024-Update
Bradi2g62280 No alias Radical SAM superfamily protein 0.03 Orthogroups_2024-Update
Brara.E00611.1 No alias RlmN-type rRNA methyltransferase 0.03 Orthogroups_2024-Update
Glyma.02G247700 No alias Radical SAM superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G068600 No alias Radical SAM superfamily protein 0.06 Orthogroups_2024-Update
Pp1s307_72V6 No alias radical sam cfr family 0.02 Orthogroups_2024-Update
Seita.5G469100.1 No alias RlmN-type rRNA methyltransferase 0.03 Orthogroups_2024-Update
Sobic.003G444500.1 No alias RlmN-type rRNA methyltransferase 0.04 Orthogroups_2024-Update
evm.model.tig00000113.127 No alias (at2g39670 : 290.0) Radical SAM superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007197 rSAM 158 321
No external refs found!