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Description : tryptophan synthase beta-subunit 1
Gene families : OG_42_0002861 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002861_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G169593 | |
| Cluster | HCCA clusters: Cluster_228 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g14490 | No alias | tryptophan synthase beta-subunit 2 | 0.04 | Orthogroups_2024-Update | |
| Brara.K00111.1 | No alias | subunit beta of tryptophan synthase complex & EC_4.2... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G420300 | No alias | tryptophan synthase beta-subunit 2 | 0.03 | Orthogroups_2024-Update | |
| Seita.6G072900.1 | No alias | subunit beta of tryptophan synthase complex & EC_4.2... | 0.03 | Orthogroups_2024-Update | |
| Sobic.007G032000.1 | No alias | subunit beta of tryptophan synthase complex & EC_4.2... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0003779 | actin binding | IEP | Predicted GO |
| MF | GO:0004650 | polygalacturonase activity | IEP | Predicted GO |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
| MF | GO:0005215 | transporter activity | IEP | Predicted GO |
| CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
| BP | GO:0006534 | cysteine metabolic process | IEP | Predicted GO |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Predicted GO |
| BP | GO:0006563 | L-serine metabolic process | IEP | Predicted GO |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0015267 | channel activity | IEP | Predicted GO |
| CC | GO:0016020 | membrane | IEP | Predicted GO |
| MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Predicted GO |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Predicted GO |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0030151 | molybdenum ion binding | IEP | Predicted GO |
| BP | GO:0042126 | nitrate metabolic process | IEP | Predicted GO |
| BP | GO:0042128 | nitrate assimilation | IEP | Predicted GO |
| BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
| BP | GO:2001057 | reactive nitrogen species metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001926 | PLP-dep | 129 | 459 |
| No external refs found! |