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  5. GRMZM2G169699

GRMZM2G169699


Description : Low PSII Accumulation 3


Gene families : OG_42_0005888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G169699
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Bradi3g01550 No alias Low PSII Accumulation 3 0.05 Orthogroups_2024-Update
LOC_Os02g02520 No alias expressed protein 0.04 Orthogroups_2024-Update
Potri.001G044000 No alias Low PSII Accumulation 3 0.02 Orthogroups_2024-Update
Pp1s190_86V6 No alias F3N23.27; leucine-rich repeat family protein... 0.02 Orthogroups_2024-Update
Sobic.004G012900.1 No alias protein involved in PS-II assembly *(LPA3) 0.03 Orthogroups_2024-Update
evm.model.contig_3407.3 No alias (at1g73060 : 177.0) Low PSII Accumulation 3 (LPA3);... 0.01 Orthogroups_2024-Update
evm.model.tig00000792.24 No alias (at1g73060 : 155.0) Low PSII Accumulation 3 (LPA3);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018962 DUF1995 73 335
No external refs found!