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  5. At1g48000

At1g48000


Description : MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g48000
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
A4A49_00243 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.04 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_28008 No alias transcription repressor myb5 0.04 Orthogroups_2024-Update
At1g09540 No alias MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4] 0.04 Orthogroups_2024-Update
At1g16490 No alias Transcription factor MYB58... 0.04 Orthogroups_2024-Update
At1g34670 No alias Transcription factor MYB93... 0.04 Orthogroups_2024-Update
At1g68320 No alias Transcription factor MYB62... 0.04 Orthogroups_2024-Update
At1g79180 No alias myb domain protein 63 [Source:TAIR;Acc:AT1G79180] 0.03 Orthogroups_2024-Update
At5g40350 No alias Transcription factor MYB24... 0.03 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.03 Orthogroups_2024-Update
Bradi2g24400 No alias myb domain protein 6 0.03 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Bradi4g36460 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Brara.A00330.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Brara.A02585.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.C04156.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Brara.E03665.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.F02110.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Brara.G03210.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H01124.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.I00351.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.K01188.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G017268 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
GRMZM2G167829 No alias myb domain protein 87 0.03 Orthogroups_2024-Update
GRMZM2G176327 No alias myb domain protein 112 0.04 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.03G258700 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Glyma.05G211200 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.06G003800 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.06G193600 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.08G042100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Glyma.08G317800 No alias myb domain protein 97 0.02 Orthogroups_2024-Update
Glyma.10G236400 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.11G030200 No alias myb domain protein 85 0.03 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.13G050400 No alias myb domain protein 83 0.04 Orthogroups_2024-Update
Glyma.13G339900 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.04 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.04 Orthogroups_2024-Update
Glyma.19G024700 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
HORVU5Hr1G036900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_121533g0010 No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00026452-RA No alias (at3g61250 : 251.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00031962-RA No alias (at4g13480 : 170.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.002G157600 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.02 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
Seita.3G055800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G274200.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G183800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G155900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G178300.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc10g008700 No alias R2R3MYB transcription factor 49 0.03 Orthogroups_2024-Update
Solyc12g099120 No alias Abscisic acid induced MYB1 0.03 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g023610 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 34 81
IPR001005 SANT/Myb 88 130
No external refs found!