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GRMZM2G172230


Description : Clp ATPase


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G172230
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Bradi2g19540 No alias heat shock protein 101 0.04 Orthogroups_2024-Update
Brara.I04445.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.04 Orthogroups_2024-Update
Brara.J01953.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.04 Orthogroups_2024-Update
Glyma.06G202200 No alias heat shock protein 101 0.03 Orthogroups_2024-Update
HORVU5Hr1G081860.4 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.04 Orthogroups_2024-Update
HORVU7Hr1G105270.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G105430.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G105530.5 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G177700.1 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.04 Orthogroups_2024-Update
Seita.6G076400.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Seita.9G360800.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.03 Orthogroups_2024-Update
Sobic.001G333500.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004061 arylformamidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 660 833
IPR004176 Clp_N 89 132
IPR004176 Clp_N 177 218
IPR019489 Clp_ATPase_C 840 918
IPR003959 ATPase_AAA_core 312 428
No external refs found!