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  5. At1g48090

At1g48090


Description : calcium-dependent lipid-binding family protein [Source:TAIR;Acc:AT1G48090]


Gene families : OG_42_0000864 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g48090
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
444980 No alias calcium-dependent lipid-binding family protein 0.02 Orthogroups_2024-Update
82033 No alias pleckstrin homology (PH) domain-containing protein 0.04 Orthogroups_2024-Update
A4A49_38349 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi3g43345 No alias calcium-dependent lipid-binding family protein 0.03 Orthogroups_2024-Update
Brara.F00453.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Cre12.g483500 No alias pleckstrin homology (PH) domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.07G233100 No alias calcium-dependent lipid-binding family protein 0.06 Orthogroups_2024-Update
Glyma.11G039900 No alias pleckstrin homology (PH) domain-containing protein 0.04 Orthogroups_2024-Update
Kfl00451_0090 kfl00451_0090_v1.1 (at1g48090 : 1719.0) calcium-dependent lipid-binding... 0.05 Orthogroups_2024-Update
LOC_Os10g41560 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_10437247g0010 No alias (at4g17140 : 1094.0) pleckstrin homology (PH)... 0.03 Orthogroups_2024-Update
PSME_00009237-RA No alias (at1g48090 : 378.0) calcium-dependent lipid-binding... 0.04 Orthogroups_2024-Update
Potri.008G100600 No alias calcium-dependent lipid-binding family protein 0.04 Orthogroups_2024-Update
Pp1s314_26V6 No alias vacuolar protein sorting-associated 0.03 Orthogroups_2024-Update
Seita.1G158900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G293700.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g009370 No alias Calcium-dependent lipid-binding-like protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
evm.model.tig00000042.91 No alias (at4g17140 : 114.0) pleckstrin homology (PH)... 0.03 Orthogroups_2024-Update
evm.model.tig00000615.50 No alias (at1g48090 : 115.0) calcium-dependent lipid-binding... 0.01 Orthogroups_2024-Update
evm.model.tig00001343.3 No alias (at4g17140 : 125.0) pleckstrin homology (PH)... 0.02 Orthogroups_2024-Update
evm.model.tig00020554.153 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00020710.86 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00021428.20 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030677 ribonuclease P complex IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009291 Vps62 2269 2409
IPR009291 Vps62 2045 2182
IPR031646 VPS13_N2 158 423
IPR031642 VPS13_mid_rpt 617 846
IPR026854 VPS13_N 26 134
IPR000008 C2_dom 2661 2773
IPR009543 SHR-BD 3160 3443
No external refs found!