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  5. GRMZM2G173119

GRMZM2G173119


Description : associated molecule with the SH3 domain of STAM 3


Gene families : OG_42_0001868 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001868_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G173119
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Bradi2g12550 No alias associated molecule with the SH3 domain of STAM 3 0.04 Orthogroups_2024-Update
Bradi2g13590 No alias associated molecule with the SH3 domain of STAM 3 0.04 Orthogroups_2024-Update
Brara.C04481.1 No alias deubiquitinase *(AMSH) 0.03 Orthogroups_2024-Update
LOC_Os01g31470 No alias mov34/MPN/PAD-1 family protein, expressed 0.02 Orthogroups_2024-Update
Pp1s133_43V6 No alias contains ESTs... 0.02 Orthogroups_2024-Update
Seita.5G159400.1 No alias deubiquitinase *(AMSH) 0.04 Orthogroups_2024-Update
Sobic.003G173600.1 No alias deubiquitinase *(AMSH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR015063 USP8_dimer 18 109
IPR000555 JAMM/MPN+_dom 339 444
No external refs found!