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  5. GRMZM2G173628

GRMZM2G173628


Description : Fe superoxide dismutase 3


Gene families : OG_42_0002254 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G173628
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Bradi1g50550 No alias Fe superoxide dismutase 2 0.03 Orthogroups_2024-Update
Brara.C01493.1 No alias cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)... 0.03 Orthogroups_2024-Update
Glyma.20G050800 No alias Fe superoxide dismutase 3 0.05 Orthogroups_2024-Update
Seita.4G031200.1 No alias cofactor of plastid-encoded RNA polymerase *(PAP4/FSD3)... 0.04 Orthogroups_2024-Update
Seita.9G123900.1 No alias iron superoxide dismutase *(FSD) 0.03 Orthogroups_2024-Update
Sobic.010G012900.1 No alias iron superoxide dismutase *(FSD) 0.04 Orthogroups_2024-Update
Solyc03g095180 No alias Superoxide dismutase (AHRD V3.3 *** Q7YK44_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g025180 No alias Iron/manganese superoxide dismutases, C-terminal domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA InterProScan predictions
BP GO:0006801 superoxide metabolic process IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 1 69
IPR019832 Mn/Fe_SOD_C 76 146
No external refs found!