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Description : PNAS-3 related
Gene families : OG_42_0006616 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006616_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G173989 | |
| Cluster | HCCA clusters: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.H01321.1 | No alias | component *(RRP40) of exosome EXO9 core complex | 0.02 | Orthogroups_2024-Update | |
| Solyc06g071460 | No alias | Exosome complex exonuclease RRP40 (AHRD V3.3 *** B7FLI0_MEDTR) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint | IEP | Predicted GO |
| BP | GO:0000077 | DNA damage checkpoint | IEP | Predicted GO |
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predicted GO |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Predicted GO |
| BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Predicted GO |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Predicted GO |
| BP | GO:0009966 | regulation of signal transduction | IEP | Predicted GO |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
| BP | GO:0010646 | regulation of cell communication | IEP | Predicted GO |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Predicted GO |
| BP | GO:0023051 | regulation of signaling | IEP | Predicted GO |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Predicted GO |
| CC | GO:0030896 | checkpoint clamp complex | IEP | Predicted GO |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predicted GO |
| BP | GO:0031570 | DNA integrity checkpoint | IEP | Predicted GO |
| BP | GO:0033043 | regulation of organelle organization | IEP | Predicted GO |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Predicted GO |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Predicted GO |
| BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Predicted GO |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0051783 | regulation of nuclear division | IEP | Predicted GO |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | Predicted GO |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Predicted GO |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Predicted GO |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Predicted GO |
| BP | GO:1905818 | regulation of chromosome separation | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004088 | KH_dom_type_1 | 158 | 206 |
| No external refs found! |