GRMZM2G174716

Description : Pseudouridine synthase family protein

Gene families : OG_42_0003391 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003391_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G174716
Cluster	HCCA clusters: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
75554	No alias	Pseudouridine synthase family protein	0.02	Orthogroups_2024-Update
LOC_Os05g01750	No alias	TruB family pseudouridylate synthase, putative, expressed	0.02	Orthogroups_2024-Update
Sobic.009G007800.1	No alias	TruB-type tRNA pseudouridine synthase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	InterProScan predictions
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006353	DNA-templated transcription, termination	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002501	PsdUridine_synth_N	299	449
IPR032819	TruB_C	450	492

External Links

No external refs found!