GRMZM2G176820


Description : plastid ribosomal protein l11


Gene families : OG_42_0006605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006605_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G176820
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
230830 No alias plastid ribosomal protein l11 0.03 Orthogroups_2024-Update
A4A49_31578 No alias 50s ribosomal protein l11, chloroplastic 0.03 Orthogroups_2024-Update
Bradi1g77060 No alias plastid ribosomal protein l11 0.07 Orthogroups_2024-Update
Brara.I02689.1 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Cre10.g423650 No alias plastid ribosomal protein l11 0.07 Orthogroups_2024-Update
Glyma.01G201000 No alias plastid ribosomal protein l11 0.03 Orthogroups_2024-Update
HORVU4Hr1G084830.2 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.11 Orthogroups_2024-Update
Kfl00092_0090 kfl00092_0090_v1.1 (at1g32990 : 190.0) mutant has Decreased effective... 0.04 Orthogroups_2024-Update
PSME_00025735-RA No alias (at1g32990 : 257.0) mutant has Decreased effective... 0.02 Orthogroups_2024-Update
Potri.001G450800 No alias plastid ribosomal protein l11 0.06 Orthogroups_2024-Update
Pp1s141_43V6 No alias ribosomal protein l11 0.09 Orthogroups_2024-Update
Seita.9G561900.1 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.11 Orthogroups_2024-Update
Sobic.001G527100.1 No alias component *(uL11c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Sopen08g031560 No alias Ribosomal protein L11, N-terminal domain 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0004817 cysteine-tRNA ligase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR020783 Ribosomal_L11_C 136 204
IPR020784 Ribosomal_L11_N 67 131
No external refs found!