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  5. GRMZM2G177169

GRMZM2G177169


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0002729 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G177169
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31370 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Seita.4G191000.1 No alias stability factor *(PPR10) 0.05 Orthogroups_2024-Update
Sopen07g006580 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 240 270
IPR002885 Pentatricopeptide_repeat 663 694
IPR002885 Pentatricopeptide_repeat 171 221
IPR002885 Pentatricopeptide_repeat 404 433
IPR002885 Pentatricopeptide_repeat 703 733
IPR002885 Pentatricopeptide_repeat 457 486
IPR002885 Pentatricopeptide_repeat 739 762
IPR002885 Pentatricopeptide_repeat 278 319
IPR002885 Pentatricopeptide_repeat 488 537
IPR002885 Pentatricopeptide_repeat 594 643
IPR002885 Pentatricopeptide_repeat 348 395
No external refs found!