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At1g48790


Description : AMSH-like ubiquitin thioesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYB5]


Gene families : OG_42_0001868 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001868_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g48790
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Brara.C04481.1 No alias deubiquitinase *(AMSH) 0.03 Orthogroups_2024-Update
LOC_Os01g23640 No alias mov34/MPN/PAD-1 family protein, expressed 0.03 Orthogroups_2024-Update
evm.model.tig00000248.12 No alias (at4g16144 : 130.0) Encodes AMSH3, a deubiquitinating... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 331 436
IPR015063 USP8_dimer 18 104
No external refs found!