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  5. GRMZM2G179005

GRMZM2G179005


Description : Histone superfamily protein


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G179005
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
438193 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
A4A49_56508 No alias histone h3.2 0.03 Orthogroups_2024-Update
A4A49_57080 No alias histone h3.2 0.03 Orthogroups_2024-Update
A4A49_61103 No alias histone h3.2 0.03 Orthogroups_2024-Update
At1g09200 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.03 Orthogroups_2024-Update
At1g19890 No alias MGH3 [Source:UniProtKB/TrEMBL;Acc:A0A178WKL2] 0.06 Orthogroups_2024-Update
At4g40040 No alias Histone H3.3 [Source:UniProtKB/Swiss-Prot;Acc:P59169] 0.02 Orthogroups_2024-Update
At5g10400 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.03 Orthogroups_2024-Update
At5g65350 No alias Histone H3-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ3] 0.02 Orthogroups_2024-Update
At5g65360 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.03 Orthogroups_2024-Update
Bradi1g49990 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g49997 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Brara.B00354.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.B03430.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.C00416.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.D00649.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.H02834.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Brara.J02314.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Cre06.g264650 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g265250 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre06.g267950 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g268350 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g274000 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g274850 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre06.g276600 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g504800 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g505500 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Cre17.g708150 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre17.g708700 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G188600 No alias Histone superfamily protein 0.08 Orthogroups_2024-Update
Glyma.05G188700 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.07G202500 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.08G227400 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.08G245000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G130900 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.12G055200 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.13G173100 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.13G342000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G032300 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.15G222200 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.17G176600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G255602 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G266200 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G090210.1 No alias histone *(H3) 0.06 Orthogroups_2024-Update
HORVU4Hr1G073150.1 No alias histone *(H3) 0.06 Orthogroups_2024-Update
HORVU6Hr1G007820.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU6Hr1G011520.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU6Hr1G031580.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
HORVU7Hr1G012820.2 No alias histone *(H3) 0.04 Orthogroups_2024-Update
HORVU7Hr1G024990.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
HORVU7Hr1G033030.1 No alias histone *(H3) 0.08 Orthogroups_2024-Update
HORVU7Hr1G034470.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
HORVU7Hr1G100380.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G100450.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
Kfl00240_g18 kfl00240_g18_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Kfl00417_0090 kfl00417_0090_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
LOC_Os04g34240 No alias histone H3, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g05730 No alias histone H3, putative, expressed 0.02 Orthogroups_2024-Update
MA_259842g0010 No alias (at5g10980 : 266.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_350032g0010 No alias (at5g10980 : 266.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
MA_475294g0010 No alias (at5g65360 : 226.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_56411g0010 No alias (at5g65360 : 262.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_74555g0010 No alias (at5g65360 : 127.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp3g09090.1 No alias histone (H3) 0.02 Orthogroups_2024-Update
Mp7g10730.1 No alias histone (H3) 0.03 Orthogroups_2024-Update
Mp7g16200.1 No alias histone (H3) 0.02 Orthogroups_2024-Update
Mp7g18030.1 No alias histone (H3) 0.02 Orthogroups_2024-Update
PSME_00005861-RA No alias (at5g65360 : 181.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00015728-RA No alias (at5g65360 : 167.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.002G026800 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Potri.003G208200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Pp1s12_93V6 No alias histone h3 0.03 Orthogroups_2024-Update
Seita.3G227400.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Seita.4G066000.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Sobic.001G350501.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Solyc01g074000 No alias Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) 0.05 Orthogroups_2024-Update
Solyc01g079110 No alias Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.04 Orthogroups_2024-Update
Solyc01g080600 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.04 Orthogroups_2024-Update
Solyc01g086820 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.05 Orthogroups_2024-Update
Solyc02g077480 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.05 Orthogroups_2024-Update
Solyc04g074580 No alias Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) 0.05 Orthogroups_2024-Update
Solyc05g051500 No alias WEB family protein, chloroplastic (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc10g008910 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.05 Orthogroups_2024-Update
Solyc12g056540 No alias Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC) 0.06 Orthogroups_2024-Update
Sopen00g011880 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g030620 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g030790 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g032420 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g033540 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen01g033560 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g033790 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g033820 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen01g033830 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen02g022390 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.09 Orthogroups_2024-Update
Sopen11g005010 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen12g029140 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
evm.model.contig_2255.2 No alias (at5g10980 : 218.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 36 167
No external refs found!