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  5. GRMZM2G179768

GRMZM2G179768


Description : matrix metalloproteinase


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G179768
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
At1g70170 No alias Metalloendoproteinase 2-MMP... 0.03 Orthogroups_2024-Update
Bradi1g78530 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Glyma.02G028700 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
LOC_Os06g13180 No alias metalloendoproteinase 1 precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00057126-RA No alias (at1g70170 : 290.0) mutant has Late flowering; Early... 0.05 Orthogroups_2024-Update
Potri.001G340700 No alias Matrixin family protein 0.02 Orthogroups_2024-Update
Potri.003G077400 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Potri.004G190300 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Seita.4G105900.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.04 Orthogroups_2024-Update
Seita.9G325000.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0031012 extracellular matrix IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 28 187
No external refs found!