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GRMZM2G307588


Description : squamosa promoter binding protein-like 9


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G307588
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G031450.6 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Potri.012G100700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Pp1s118_9V6 No alias sbp1 gene for squamosa promoter-binding protein SBP1 0.02 Orthogroups_2024-Update
Sobic.002G312300.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G247700.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 64 137
No external refs found!