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At1g50050


Description : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4X9]


Gene families : OG_42_0000094 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g50050
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
A4A49_42492 No alias basic form of pathogenesis-related protein 1 0.02 Orthogroups_2024-Update
LOC_Os07g03458 No alias SCP-like extracellular protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g03590 No alias SCP-like extracellular protein, expressed 0.02 Orthogroups_2024-Update
Solyc09g007010 No alias Pathogenesis-related protein 1 (AHRD V3.3 *** Q75QH2_CAPCH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR014044 CAP_domain 31 150
No external refs found!