GRMZM2G311756

Description : seed imbibition 2

Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G311756
Cluster	HCCA clusters: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method
At3g57520	No alias	Probable galactinol--sucrose galactosyltransferase 2...	0.02	Orthogroups_2024-Update
Brara.D01062.1	No alias	raffinose synthase	0.03	Orthogroups_2024-Update
Glyma.05G003900	No alias	Raffinose synthase family protein	0.04	Orthogroups_2024-Update
HORVU3Hr1G016430.3	No alias	raffinose synthase	0.03	Orthogroups_2024-Update
PSME_00001319-RA	No alias	(at1g55740 : 564.0) seed imbibition 1 (SIP1); CONTAINS...	0.02	Orthogroups_2024-Update
PSME_00005466-RA	No alias	(at5g20250 : 946.0) encodes a member of glycosyl...	0.03	Orthogroups_2024-Update
Potri.013G159100	No alias	Raffinose synthase family protein	0.03	Orthogroups_2024-Update
Pp1s8_24V6	No alias	stachyose synthase	0.02	Orthogroups_2024-Update
Seita.4G057000.1	No alias	galactinol-sucrose galactosyltransferase	0.02	Orthogroups_2024-Update
Seita.5G119800.1	No alias	raffinose synthase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0004470	malic enzyme activity	IEP	Predicted GO
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
MF	GO:0016615	malate dehydrogenase activity	IEP	Predicted GO
MF	GO:2001070	starch binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR008811	Glycosyl_hydrolases_36	1	386

External Links

No external refs found!