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  5. GRMZM2G313553

GRMZM2G313553


Description : SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein


Gene families : OG_42_0002458 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002458_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G313553
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
76516 No alias chromatin remodeling factor18 0.02 Orthogroups_2024-Update
A4A49_00817 No alias chd3-type chromatin-remodeling factor pickle 0.04 Orthogroups_2024-Update
Sopen12g033610 No alias SNF2 family N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004519 endonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002711 HNH 664 700
IPR001650 Helicase_C 140 229
No external refs found!