At1g50640

Description : Uncharacterized protein At1g50640 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV01]

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g50640
Cluster	HCCA clusters: Cluster_191

Target	Alias	Description	ECC score	Gene Family Method
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.04	Orthogroups_2024-Update
A4A49_16579	No alias	ethylene-responsive transcription factor abr1	0.03	Orthogroups_2024-Update
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_18156	No alias	ethylene-responsive transcription factor shine 3	0.03	Orthogroups_2024-Update
AC187157.4_FG001	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
At1g22190	No alias	Ethylene-responsive transcription factor RAP2-13...	0.03	Orthogroups_2024-Update
At3g23230	No alias	Ethylene-responsive transcription factor ERF098...	0.03	Orthogroups_2024-Update
Brara.A00653.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Brara.B02302.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.E02695.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.F03308.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.G00521.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.J02251.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.K00056.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
GRMZM2G039112	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
GRMZM2G171179	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
GRMZM2G421033	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
Glyma.01G224100	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.05G049900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.05G179900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G320700	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.13G081600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.16G164800	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
LOC_Os03g22170	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g46250	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g55520	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g29810	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g41780	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g11480	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g41060	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
Mp6g18650.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.01	Orthogroups_2024-Update
PSME_00003641-RA	No alias	(at3g14230 : 136.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00052455-RA	No alias	(at1g19210 : 114.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00054258-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.003G079300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.010G072300	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Potri.011G057000	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Potri.019G088000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s133_11V6	No alias	c-repeat binding factor 4	0.02	Orthogroups_2024-Update
Pp1s138_190V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s233_111V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s25_13V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.6G227100.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.004G100500.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G103000.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.006G210300.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G077001.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.007G077300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Solyc03g026280	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc04g078640	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc07g049490	No alias	Ethylene Response Factor F.3	0.03	Orthogroups_2024-Update
Sopen03g024430	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen06g022520	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g024840	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004474	malate synthase activity	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006097	glyoxylate cycle	IEP	Predicted GO
BP	GO:0006665	sphingolipid metabolic process	IEP	Predicted GO
BP	GO:0006672	ceramide metabolic process	IEP	Predicted GO
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO
BP	GO:0046487	glyoxylate metabolic process	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO
BP	GO:0048580	regulation of post-embryonic development	IEP	Predicted GO
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predicted GO
BP	GO:0050793	regulation of developmental process	IEP	Predicted GO
BP	GO:0051094	positive regulation of developmental process	IEP	Predicted GO
BP	GO:0051239	regulation of multicellular organismal process	IEP	Predicted GO
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Predicted GO
BP	GO:2000026	regulation of multicellular organismal development	IEP	Predicted GO
BP	GO:2000038	regulation of stomatal complex development	IEP	Predicted GO
BP	GO:2000123	positive regulation of stomatal complex development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	28	76

External Links

No external refs found!

At1g50640

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation