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GRMZM2G325019


Description : endonucleases


Gene families : OG_42_0006907 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G325019
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
At2g15820 No alias Pentatricopeptide repeat-containing protein At2g15820,... 0.05 Orthogroups_2024-Update
Bradi3g52580 No alias endonucleases 0.03 Orthogroups_2024-Update
Brara.G00360.1 No alias plastidial RNA splicing factor *(OTP51) 0.05 Orthogroups_2024-Update
Glyma.07G178800 No alias endonucleases 0.03 Orthogroups_2024-Update
HORVU6Hr1G068490.1 No alias plastidial RNA splicing factor *(OTP51) 0.02 Orthogroups_2024-Update
Potri.009G106800 No alias endonucleases 0.05 Orthogroups_2024-Update
Seita.1G287400.1 No alias plastidial RNA splicing factor *(OTP51) 0.05 Orthogroups_2024-Update
Seita.6G252200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G269600.1 No alias plastidial RNA splicing factor *(OTP51) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 507 532
IPR002885 Pentatricopeptide_repeat 469 497
IPR002885 Pentatricopeptide_repeat 184 206
IPR002885 Pentatricopeptide_repeat 363 408
IPR004860 LAGLIDADG_2 570 736
No external refs found!