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At1g51270


Description : Vesicle-associated protein 1-4 [Source:UniProtKB/TrEMBL;Acc:F4I818]


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g51270
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
A4A49_30064 No alias vesicle-associated protein 2-1 0.03 Orthogroups_2024-Update
Brara.I05294.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
GRMZM2G074173 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.03 Orthogroups_2024-Update
Glyma.01G205300 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.06 Orthogroups_2024-Update
LOC_Os02g44300 No alias MSP domain containing protein, expressed 0.03 Orthogroups_2024-Update
Solyc08g007390 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000157 TIR_dom 357 518
IPR000535 MSP_dom 9 112
IPR000535 MSP_dom 177 282
No external refs found!