GRMZM2G327263

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_42_0001104 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G327263
Cluster	HCCA clusters: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os04g32230	No alias	hypothetical protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
BP	GO:0030258	lipid modification	IEP	Predicted GO
BP	GO:0030259	lipid glycosylation	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0070085	glycosylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	1395	1423
IPR003653	Peptidase_C48_C	93	291
IPR005062	SAC3/GANP/THP3	640	691
IPR002885	Pentatricopeptide_repeat	1317	1370
IPR002885	Pentatricopeptide_repeat	1117	1167
IPR002885	Pentatricopeptide_repeat	1189	1235
IPR002885	Pentatricopeptide_repeat	1258	1307
IPR010399	Tify_dom	768	800
IPR018467	CCT_CS	846	871

External Links

No external refs found!