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  5. GRMZM2G336761

GRMZM2G336761


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G336761
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Bradi4g44277 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G101400 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
LOC_Os12g04590 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
MA_10267109g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_79051g0010 No alias (at3g19950 : 171.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00014469-RA No alias (at3g19950 : 173.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
Potri.014G093500 No alias Protease-associated (PA) RING/U-box zinc finger family protein 0.03 Orthogroups_2024-Update
Seita.9G178700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc10g045180 No alias E3 ubiquitin-protein ligase (AHRD V3.3 --* A0A0F7G5V7_9ROSI) 0.08 Orthogroups_2024-Update
Sopen08g024560 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 354 395
No external refs found!