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  5. At1g51950

At1g51950


Description : Auxin-responsive protein IAA18 [Source:UniProtKB/Swiss-Prot;Acc:O24408]


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g51950
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
A4A49_10855 No alias auxin-induced protein 22d 0.04 Orthogroups_2024-Update
Bradi1g55370 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Bradi2g33417 No alias phytochrome-associated protein 1 0.02 Orthogroups_2024-Update
Brara.A02683.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.E01960.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Glyma.01G098000 No alias indole-3-acetic acid inducible 9 0.03 Orthogroups_2024-Update
HORVU5Hr1G094220.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
LOC_Os01g53880 No alias OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
Potri.008G172400 No alias auxin-induced protein 13 0.03 Orthogroups_2024-Update
Seita.3G109400.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Seita.5G312700.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Seita.9G162900.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sopen00g009470 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen00g014090 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen12g032790 No alias AUX/IAA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 84 252
No external refs found!