GRMZM2G338259

Description : auxin response factor 2

Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G338259
Cluster	HCCA clusters: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g32547	No alias	auxin response factor 6	0.02	Orthogroups_2024-Update
Bradi1g33160	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Bradi4g17410	No alias	auxin response factor 2	0.04	Orthogroups_2024-Update
Brara.B03784.1	No alias	ARF-type transcription factor	0.05	Orthogroups_2024-Update
Brara.D00871.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00855.1	No alias	ARF-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G441325	No alias	Transcriptional factor B3 family protein /...	0.04	Orthogroups_2024-Update
GRMZM2G475263	No alias	auxin response factor 11	0.04	Orthogroups_2024-Update
Glyma.01G103500	No alias	auxin response factor 9	0.02	Orthogroups_2024-Update
Glyma.10G210600	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Glyma.13G221400	No alias	auxin response factor 8	0.02	Orthogroups_2024-Update
Glyma.13G234200	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Glyma.15G181000	No alias	auxin response factor 19	0.02	Orthogroups_2024-Update
Glyma.17G047100	No alias	Transcriptional factor B3 family protein /...	0.02	Orthogroups_2024-Update
HORVU6Hr1G026750.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
LOC_Os04g36054	No alias	auxin response factor 9, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g32110	No alias	auxin response factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os12g29520	No alias	auxin response factor, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00023239-RA	No alias	(at1g30330 : 665.0) Encodes a member of the auxin...	0.02	Orthogroups_2024-Update
Potri.004G078200	No alias	auxin response factor 8	0.02	Orthogroups_2024-Update
Potri.006G077800	No alias	Transcriptional factor B3 family protein /...	0.02	Orthogroups_2024-Update
Potri.016G090300	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Pp1s119_32V6	No alias	auxin response	0.02	Orthogroups_2024-Update
Pp1s279_9V6	No alias	arf gene for putative auxin response factor protein ARF	0.02	Orthogroups_2024-Update
Pp1s86_1V6	No alias	auxin response	0.02	Orthogroups_2024-Update
Seita.4G257800.1	No alias	ARF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G037800.1	No alias	ARF-type transcription factor	0.04	Orthogroups_2024-Update
Solyc01g096070	No alias	Auxin Response Factor 18	0.04	Orthogroups_2024-Update
Solyc01g103050	No alias	Auxin Response Factor 1	0.02	Orthogroups_2024-Update
Solyc03g031970	No alias	Auxin response factor (AHRD V3.3 *** A0A191T8S7_SALMI)	0.03	Orthogroups_2024-Update
Solyc03g118290	No alias	auxin response factor 2A	0.03	Orthogroups_2024-Update
Solyc08g008380	No alias	Auxin Response Factor 9B	0.02	Orthogroups_2024-Update
Solyc08g082630	No alias	Auxin Response Factor 9A	0.03	Orthogroups_2024-Update
Solyc12g042070	No alias	Auxin Response Factor 2B	0.03	Orthogroups_2024-Update
Sopen00g003680	No alias	Auxin response factor	0.04	Orthogroups_2024-Update
Sopen05g027770	No alias	Auxin response factor	0.04	Orthogroups_2024-Update
Sopen08g004260	No alias	Auxin response factor	0.02	Orthogroups_2024-Update
Sopen11g028210	No alias	Auxin response factor	0.02	Orthogroups_2024-Update
Sopen12g002300	No alias	Auxin response factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
BP	GO:0009060	aerobic respiration	IEP	Predicted GO
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Predicted GO
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0019825	oxygen binding	IEP	Predicted GO
BP	GO:0045333	cellular respiration	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	128	229
IPR033389	AUX/IAA_dom	730	768
IPR033389	AUX/IAA_dom	673	726
IPR010525	Auxin_resp	254	335

External Links

No external refs found!

GRMZM2G338259

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation