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GRMZM2G340130


Description : evolutionarily conserved C-terminal region 2


Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G340130
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Bradi1g05970 No alias evolutionarily conserved C-terminal region 2 0.03 Orthogroups_2024-Update
HORVU5Hr1G104380.1 No alias methylation reader *(ECT) 0.04 Orthogroups_2024-Update
HORVU5Hr1G104390.2 No alias methylation reader *(ECT) 0.02 Orthogroups_2024-Update
Seita.9G059600.1 No alias methylation reader *(ECT) 0.02 Orthogroups_2024-Update
Seita.9G092900.1 No alias methylation reader *(ECT) 0.03 Orthogroups_2024-Update
Sobic.002G047000.2 No alias methylation reader *(ECT) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007275 YTH_domain 393 530
No external refs found!