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Description : RING/U-box superfamily protein
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G340444 | |
| Cluster | HCCA clusters: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 172324 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| A4A49_18116 | No alias | ring-h2 finger protein atl78 | 0.03 | Orthogroups_2024-Update | |
| A4A49_37314 | No alias | e3 ubiquitin-protein ligase atl9 | 0.01 | Orthogroups_2024-Update | |
| At1g72220 | No alias | RING-H2 finger protein ATL54... | 0.03 | Orthogroups_2024-Update | |
| At3g11110 | No alias | RING-H2 finger protein ATL66... | 0.03 | Orthogroups_2024-Update | |
| Brara.C01805.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Brara.C03704.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.D02285.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.E00161.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.E00442.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.H00318.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Glyma.14G177900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G014700 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU3Hr1G028280.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G096480.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G011010.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G080020.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g35144 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os06g09310 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_10429624g0010 | No alias | (at3g05200 : 133.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
| MA_114175g0010 | No alias | (at3g16720 : 124.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
| MA_26001g0020 | No alias | (at1g72310 : 117.0) Encodes a putative RING-H2 zinc... | 0.03 | Orthogroups_2024-Update | |
| PSME_00040633-RA | No alias | (q40682|ef1d2_orysa : 94.4) Elongation factor 1-delta 2... | 0.01 | Orthogroups_2024-Update | |
| Potri.002G101800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.016G067900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s38_53V6 | No alias | ring-h2 finger protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s71_157V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.02 | Orthogroups_2024-Update | |
| Seita.1G203900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.1G379200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.3G374600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.01 | Orthogroups_2024-Update | |
| Sobic.002G416300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G170300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G181300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G187800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G110400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G071000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Sopen02g016820 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen12g031590 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
| MF | GO:0004819 | glutamine-tRNA ligase activity | IEP | Predicted GO |
| BP | GO:0006425 | glutaminyl-tRNA aminoacylation | IEP | Predicted GO |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| MF | GO:0030410 | nicotianamine synthase activity | IEP | Predicted GO |
| BP | GO:0030417 | nicotianamine metabolic process | IEP | Predicted GO |
| BP | GO:0030418 | nicotianamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 239 | 282 |
| No external refs found! |