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At1g52230


Description : Photosystem I reaction center subunit VI-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SUI6]


Gene families : OG_42_0004367 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g52230
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_26930 No alias photosystem i reaction center subunit vi, chloroplastic 0.08 Orthogroups_2024-Update
A4A49_56724 No alias photosystem i reaction center subunit vi, chloroplastic 0.08 Orthogroups_2024-Update
Bradi2g16810 No alias photosystem I subunit H2 0.07 Orthogroups_2024-Update
Brara.A03077.1 No alias component *(PsaH) of PS-I complex 0.11 Orthogroups_2024-Update
Brara.E02538.1 No alias component *(PsaH) of PS-I complex 0.12 Orthogroups_2024-Update
Brara.F00205.1 No alias component *(PsaH) of PS-I complex 0.06 Orthogroups_2024-Update
Brara.H00177.1 No alias component *(PsaH) of PS-I complex 0.08 Orthogroups_2024-Update
Cre07.g330250 No alias photosystem I subunit H-1 0.09 Orthogroups_2024-Update
Glyma.07G019700 No alias photosystem I subunit H2 0.08 Orthogroups_2024-Update
Glyma.08G204800 No alias photosystem I subunit H2 0.06 Orthogroups_2024-Update
Glyma.13G357300 No alias photosystem I subunit H2 0.06 Orthogroups_2024-Update
Glyma.15G016300 No alias photosystem I subunit H2 0.05 Orthogroups_2024-Update
HORVU0Hr1G001490.2 No alias component *(PsaH) of PS-I complex 0.04 Orthogroups_2024-Update
Kfl00269_0020 kfl00269_0020_v1.1 (at1g52230 : 106.0) photosystem I subunit H2 (PSAH2);... 0.03 Orthogroups_2024-Update
MA_65259g0010 No alias (p20143|psah_horvu : 147.0) Photosystem I reaction... 0.04 Orthogroups_2024-Update
Mp7g13220.1 No alias component PsaH of PS-I complex 0.05 Orthogroups_2024-Update
PSME_00050341-RA No alias (o65101|psah_maize : 148.0) Photosystem I reaction... 0.03 Orthogroups_2024-Update
Potri.003G052500 No alias photosystem I subunit H2 0.03 Orthogroups_2024-Update
Pp1s206_11V6 No alias photosystem i reaction center subunit chloroplast 0.1 Orthogroups_2024-Update
Pp1s89_62V6 No alias photosystem i reaction center subunit chloroplast 0.08 Orthogroups_2024-Update
Seita.3G149000.1 No alias component *(PsaH) of PS-I complex 0.05 Orthogroups_2024-Update
Sobic.009G229700.1 No alias component *(PsaH) of PS-I complex 0.08 Orthogroups_2024-Update
Solyc03g120640 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc06g066640 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.07 Orthogroups_2024-Update
Solyc12g044280 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.08 Orthogroups_2024-Update
Sopen00g011820 No alias Photosystem I reaction centre subunit VI 0.07 Orthogroups_2024-Update
Sopen06g024910 No alias Photosystem I reaction centre subunit VI 0.09 Orthogroups_2024-Update
Sopen12g022520 No alias Photosystem I reaction centre subunit VI 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004928 PSI_PsaH 7 145
No external refs found!