GRMZM2G343543

Description : GTP binding Elongation factor Tu family protein

Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G343543
Cluster	HCCA clusters: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
169717	No alias	GTP binding Elongation factor Tu family protein	0.05	Orthogroups_2024-Update
171512	No alias	GTP binding Elongation factor Tu family protein	0.07	Orthogroups_2024-Update
At5g60390	No alias	Elongation factor 1-alpha 4...	0.03	Orthogroups_2024-Update
Bradi0012s00100	No alias	GTP binding Elongation factor Tu family protein	0.06	Orthogroups_2024-Update
Bradi1g06851	No alias	GTP binding Elongation factor Tu family protein	0.06	Orthogroups_2024-Update
Bradi1g06861	No alias	GTP binding Elongation factor Tu family protein	0.07	Orthogroups_2024-Update
Bradi1g06870	No alias	GTP binding Elongation factor Tu family protein	0.07	Orthogroups_2024-Update
Bradi1g65725	No alias	GTP binding Elongation factor Tu family protein	0.05	Orthogroups_2024-Update
Brara.B01038.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.04	Orthogroups_2024-Update
Brara.B01040.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.06	Orthogroups_2024-Update
Brara.C01040.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.05	Orthogroups_2024-Update
Brara.H02895.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.02	Orthogroups_2024-Update
Brara.J01398.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.03	Orthogroups_2024-Update
Glyma.05G089000	No alias	GTP binding Elongation factor Tu family protein	0.06	Orthogroups_2024-Update
Glyma.05G114900	No alias	GTP binding Elongation factor Tu family protein	0.06	Orthogroups_2024-Update
Glyma.19G052400	No alias	GTP binding Elongation factor Tu family protein	0.03	Orthogroups_2024-Update
HORVU0Hr1G017020.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.03	Orthogroups_2024-Update
HORVU5Hr1G100700.3	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.02	Orthogroups_2024-Update
Pp1s59_188V6	No alias	elongation factor 1-	0.04	Orthogroups_2024-Update
Seita.3G265600.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.02	Orthogroups_2024-Update
Seita.3G265700.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.06	Orthogroups_2024-Update
Seita.9G442900.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.05	Orthogroups_2024-Update
Seita.9G443000.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.05	Orthogroups_2024-Update
Sobic.010G182100.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.09	Orthogroups_2024-Update
Sobic.010G182300.1	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.09	Orthogroups_2024-Update
Sobic.010G182600.4	No alias	aminoacyl-tRNA binding factor *(eEF1A))	0.06	Orthogroups_2024-Update
Solyc06g005060	No alias	elongation factor 1-alpha	0.05	Orthogroups_2024-Update
Solyc06g009960	No alias	Elongation factor 1-alpha (AHRD V3.3 - EF1A_SOLLC)	0.03	Orthogroups_2024-Update
Sopen06g004580	No alias	Elongation factor Tu C-terminal domain	0.03	Orthogroups_2024-Update
Sopen06g004650	No alias	Elongation factor Tu GTP binding domain	0.08	Orthogroups_2024-Update
Sopen11g027830	No alias	Elongation factor Tu GTP binding domain	0.05	Orthogroups_2024-Update
evm.model.contig_509.2	No alias	(p25698\|ef1a_soybn : 335.0) Elongation factor 1-alpha...	0.09	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Predicted GO
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
BP	GO:0006551	leucine metabolic process	IEP	Predicted GO
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Predicted GO
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predicted GO
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009098	leucine biosynthetic process	IEP	Predicted GO
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Predicted GO
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
BP	GO:0043933	protein-containing complex subunit organization	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
BP	GO:0045116	protein neddylation	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO
BP	GO:0051259	protein complex oligomerization	IEP	Predicted GO
BP	GO:0051260	protein homooligomerization	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	248	313
IPR004160	Transl_elong_EFTu/EF1A_C	322	429
IPR000795	TF_GTP-bd_dom	5	221

External Links

No external refs found!

GRMZM2G343543

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation