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  5. GRMZM2G343917

GRMZM2G343917


Description : HAC13 protein (HAC13)


Gene families : OG_42_0004219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G343917
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
At1g32750 No alias Transcription initiation factor TFIID subunit 1... 0.03 Orthogroups_2024-Update
Bradi1g30648 No alias HAC13 protein (HAC13) 0.08 Orthogroups_2024-Update
Cre10.g425501 No alias HAC13 protein (HAC13) 0.02 Orthogroups_2024-Update
Glyma.04G123500 No alias HAC13 protein (HAC13) 0.04 Orthogroups_2024-Update
Glyma.09G215000 No alias HAC13 protein (HAC13) 0.03 Orthogroups_2024-Update
Mp5g22790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.03 Orthogroups_2024-Update
Seita.4G200100.1 No alias component *(HAF/TAF1) of TFIId basal transcription... 0.04 Orthogroups_2024-Update
Sobic.010G206900.1 No alias component *(HAF/TAF1) of TFIId basal transcription... 0.07 Orthogroups_2024-Update
evm.model.contig_545.15 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000724 double-strand break repair via homologous recombination IEP Predicted GO
BP GO:0000725 recombinational repair IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006906 vesicle fusion IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0016050 vesicle organization IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Predicted GO
BP GO:0048284 organelle fusion IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0090174 organelle membrane fusion IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022591 TFIID_sub1_DUF3591 1 235
No external refs found!