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  5. GRMZM2G348846

GRMZM2G348846


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G348846
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
A4A49_11752 No alias flavin-dependent oxidoreductase fox5 0.02 Orthogroups_2024-Update
Brara.A01128.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I02779.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.08G059000 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080500 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.20G213100 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
LOC_Os02g14090 No alias berberine and berberine like domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g35560 No alias reticuline oxidase-like protein precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g35650 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00033064-RA No alias (at4g20860 : 370.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.001G459200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Pp1s128_133V6 No alias fad-binding protein 0.02 Orthogroups_2024-Update
Solyc02g070090 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc02g079480 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1) 0.02 Orthogroups_2024-Update
Solyc10g054530 No alias FAD-binding Berberine family protein, putative (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 470 519
IPR006094 Oxid_FAD_bind_N 88 226
No external refs found!