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  5. At1g52880

At1g52880


Description : NARS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W6K4]


Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g52880
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
A4A49_40664 No alias nac transcription factor 56 0.04 Orthogroups_2024-Update
Bradi1g53770 No alias NAC domain containing protein 102 0.03 Orthogroups_2024-Update
Bradi2g25150 No alias NAC domain containing protein 35 0.03 Orthogroups_2024-Update
Bradi2g57297 No alias NAC domain containing protein 35 0.02 Orthogroups_2024-Update
Bradi4g07527 No alias NAC domain containing protein 47 0.05 Orthogroups_2024-Update
Brara.B02161.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E03468.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G068973 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Orthogroups_2024-Update
Glyma.02G070000 No alias NAC domain containing protein 47 0.02 Orthogroups_2024-Update
Glyma.04G208300 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Glyma.06G166500 No alias NAC domain containing protein 83 0.03 Orthogroups_2024-Update
Glyma.08G009700 No alias NAC domain containing protein 83 0.02 Orthogroups_2024-Update
Glyma.13G280000 No alias NAC domain containing protein 2 0.04 Orthogroups_2024-Update
HORVU3Hr1G080100.7 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g34600 No alias no apical meristem protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10431189g0020 No alias (at2g02450 : 248.0) NAC domain containing protein 35... 0.03 Orthogroups_2024-Update
MA_10434250g0010 No alias (at2g02450 : 274.0) NAC domain containing protein 35... 0.04 Orthogroups_2024-Update
MA_75192g0010 No alias (q52qh4|nac68_orysa : 268.0) NAC domain-containing... 0.03 Orthogroups_2024-Update
MA_95225g0010 No alias (at2g02450 : 286.0) NAC domain containing protein 35... 0.03 Orthogroups_2024-Update
PSME_00020753-RA No alias (q52qh4|nac68_orysa : 271.0) NAC domain-containing... 0.03 Orthogroups_2024-Update
PSME_00030259-RA No alias (q7f2l3|nac48_orysa : 263.0) NAC domain-containing... 0.03 Orthogroups_2024-Update
PSME_00050136-RA No alias (q52qh4|nac68_orysa : 294.0) NAC domain-containing... 0.06 Orthogroups_2024-Update
PSME_00050750-RA No alias (at1g52880 : 206.0) Transcription factor with a NAC... 0.03 Orthogroups_2024-Update
Potri.001G404100 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Potri.005G069500 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Orthogroups_2024-Update
Potri.006G129400 No alias NAC domain containing protein 25 0.03 Orthogroups_2024-Update
Seita.2G086600.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G040200.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G385800.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G334600.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G064600.2 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Solyc06g060230 No alias NAC domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g045160 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update
Sopen05g003630 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 18 146
No external refs found!