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  5. GRMZM2G360021

GRMZM2G360021


Description : ribosomal protein L12-C


Gene families : OG_42_0003941 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G360021
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_11444 No alias 50s ribosomal protein l12, chloroplastic 0.07 Orthogroups_2024-Update
Bradi2g45730 No alias ribosomal protein L12-C 0.03 Orthogroups_2024-Update
Brara.F03180.1 No alias component *(bL12c) of large plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Cre13.g581650 No alias ribosomal protein L12-A 0.03 Orthogroups_2024-Update
Glyma.11G099300 No alias ribosomal protein L12-A 0.04 Orthogroups_2024-Update
HORVU1Hr1G089760.1 No alias component *(bL12c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
HORVU3Hr1G059810.2 No alias component *(bL12c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Kfl00181_0250 kfl00181_0250_v1.1 (q9tl30|rk12_nepol : 115.0) Chloroplast 50S ribosomal... 0.05 Orthogroups_2024-Update
Mp5g15720.1 No alias component psRPL12 of large ribosomal subunit proteome 0.02 Orthogroups_2024-Update
Potri.001G346100 No alias ribosomal protein L12-A 0.03 Orthogroups_2024-Update
Pp1s215_82V6 No alias ribosomal protein l12 0.06 Orthogroups_2024-Update
Pp1s242_95V6 No alias ribosomal protein l12 0.06 Orthogroups_2024-Update
Pp1s6_183V6 No alias ribosomal protein l12 0.07 Orthogroups_2024-Update
Seita.5G253700.1 No alias component *(bL12c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sobic.003G246400.1 No alias component *(bL12c) of large plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Sopen02g031490 No alias Ribosomal protein L7/L12 C-terminal domain 0.03 Orthogroups_2024-Update
Sopen02g031500 No alias Ribosomal protein L7/L12 C-terminal domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 116 182
IPR008932 Ribosomal_L7/L12_oligo 54 103
No external refs found!