GRMZM2G361569

Description : Ribosomal protein PSRP-3/Ycf65

Gene families : OG_42_0004267 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004267_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G361569
Cluster	HCCA clusters: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
A4A49_01353	No alias	30s ribosomal protein 3, chloroplastic	0.05	Orthogroups_2024-Update
At1g68590	No alias	30S ribosomal protein 3-1, chloroplastic...	0.02	Orthogroups_2024-Update
Bradi5g12430	No alias	Ribosomal protein PSRP-3/Ycf65	0.02	Orthogroups_2024-Update
Brara.G02807.1	No alias	component *(cS23) of small plastid ribosomal-subunit proteome	0.06	Orthogroups_2024-Update
Cre02.g083950	No alias	Ribosomal protein PSRP-3/Ycf65	0.09	Orthogroups_2024-Update
Glyma.08G364600	No alias	Ribosomal protein PSRP-3/Ycf65	0.03	Orthogroups_2024-Update
MA_19834g0010	No alias	(p82412\|rrp3_spiol : 149.0) Plastid-specific 30S...	0.03	Orthogroups_2024-Update
PSME_00010739-RA	No alias	(p82412\|rrp3_spiol : 149.0) Plastid-specific 30S...	0.02	Orthogroups_2024-Update
Potri.010G127300	No alias	Ribosomal protein PSRP-3/Ycf65	0.06	Orthogroups_2024-Update
Pp1s14_169V6	No alias	plastid-specific 30s ribosomal protein chloroplast	0.08	Orthogroups_2024-Update
Pp1s242_42V6	No alias	plastid-specific 30s ribosomal protein chloroplast	0.1	Orthogroups_2024-Update
Seita.7G125300.1	No alias	component *(cS23) of small plastid ribosomal-subunit proteome	0.08	Orthogroups_2024-Update
Sobic.006G107600.1	No alias	component *(cS23) of small plastid ribosomal-subunit proteome	0.05	Orthogroups_2024-Update
Sopen03g006970	No alias	Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004055	argininosuccinate synthase activity	IEP	Predicted GO
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0004817	cysteine-tRNA ligase activity	IEP	Predicted GO
MF	GO:0004834	tryptophan synthase activity	IEP	Predicted GO
MF	GO:0005102	signaling receptor binding	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
BP	GO:0006423	cysteinyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006525	arginine metabolic process	IEP	Predicted GO
BP	GO:0006526	arginine biosynthetic process	IEP	Predicted GO
BP	GO:0006568	tryptophan metabolic process	IEP	Predicted GO
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predicted GO
MF	GO:0008083	growth factor activity	IEP	Predicted GO
BP	GO:0008283	cell proliferation	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
MF	GO:0030545	receptor regulator activity	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0042430	indole-containing compound metabolic process	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
MF	GO:0048018	receptor ligand activity	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006924	Ribosomal_PSRP3/Ycf65	124	170

External Links

No external refs found!

GRMZM2G361569

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation