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  5. GRMZM2G361615

GRMZM2G361615


Description : PENTATRICOPEPTIDE REPEAT 596


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G361615
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
402187 No alias protein kinase family protein 0.02 Orthogroups_2024-Update
LOC_Os10g35730 No alias pentatricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
PSME_00042559-RA No alias (at1g07590 : 491.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Seita.6G051300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G252100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g078330 No alias Pentatricopeptide repeat-containing protein, putative... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 554 582
IPR002885 Pentatricopeptide_repeat 626 668
IPR002885 Pentatricopeptide_repeat 403 451
No external refs found!