Description : zinc finger (C3HC4-type RING finger) family protein
Gene families : OG_42_0001974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001974_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM2G364612 | |
Cluster | HCCA clusters: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_12307 | No alias | e3 ubiquitin-protein ligase rduf1 | 0.06 | Orthogroups_2024-Update | |
Brara.C02026.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.D02407.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Glyma.07G134600 | No alias | RING-H2 finger C2A | 0.02 | Orthogroups_2024-Update | |
Glyma.18G037000 | No alias | RING-H2 finger C2A | 0.04 | Orthogroups_2024-Update | |
Potri.001G243300 | No alias | zinc finger (C3HC4-type RING finger) family protein | 0.02 | Orthogroups_2024-Update | |
Potri.009G034800 | No alias | zinc finger (C3HC4-type RING finger) family protein | 0.05 | Orthogroups_2024-Update | |
Sobic.001G422900.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.009G010400.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
No external refs found! |