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GRMZM2G364612


Description : zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_42_0001974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G364612
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
A4A49_12307 No alias e3 ubiquitin-protein ligase rduf1 0.06 Orthogroups_2024-Update
Brara.C02026.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.D02407.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.07G134600 No alias RING-H2 finger C2A 0.02 Orthogroups_2024-Update
Glyma.18G037000 No alias RING-H2 finger C2A 0.04 Orthogroups_2024-Update
Potri.001G243300 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Potri.009G034800 No alias zinc finger (C3HC4-type RING finger) family protein 0.05 Orthogroups_2024-Update
Sobic.001G422900.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G010400.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 111 139
IPR010543 DUF1117 163 274
No external refs found!