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At1g53850


Description : Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]


Gene families : OG_42_0003071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g53850
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
A4A49_60324 No alias proteasome subunit alpha type-5 0.03 Orthogroups_2024-Update
Cre17.g724350 No alias 20S proteasome alpha subunit E1 0.03 Orthogroups_2024-Update
Seita.8G194300.1 No alias alpha-type-5 component *(PAE) of 26S proteasome & EC_3.4... 0.04 Orthogroups_2024-Update
evm.model.contig_3410.11 No alias (at3g14290 : 321.0) Encodes 20S proteasome subunit PAE2... 0.04 Orthogroups_2024-Update
evm.model.tig00000692.64 No alias (q9lsu1|psa5_orysa : 295.0) Proteasome subunit alpha... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA InterProScan predictions
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005839 proteasome core complex IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA InterProScan predictions
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 31 218
IPR000426 Proteasome_asu_N 8 30
No external refs found!