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  5. Solyc03g033980

Solyc03g033980


Description : Tubby-like F-box protein (AHRD V3.3 *** K4BFS0_SOLLC)


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g033980
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
MA_10430830g0020 No alias (at1g25280 : 520.0) Member of TLP family; tubby like... 0.03 Orthogroups_2024-Update
Potri.001G390200 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
Potri.002G034600 No alias tubby like protein 6 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 54 106
IPR000007 Tubby_C 118 403
No external refs found!