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GRMZM2G375856


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G375856
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
At5g54200 No alias Similarity to WD-containing protein... 0.02 Orthogroups_2024-Update
GRMZM2G055437 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G279400 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G532700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 610 647
IPR001680 WD40_repeat 426 458
IPR001680 WD40_repeat 535 605
No external refs found!