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  5. GRMZM2G376548

GRMZM2G376548


Description : HVA22 homologue D


Gene families : OG_42_0000566 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G376548
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Bradi2g48770 No alias HVA22-like protein F 0.03 Orthogroups_2024-Update
Brara.A01493.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B02130.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00369.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G016810.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g36440 No alias HVA22, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g30500 No alias HVA22, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g15330.1 No alias HVA22-like protein f OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.001G006000 No alias HVA22-like protein F 0.02 Orthogroups_2024-Update
Sobic.005G121200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc10g007820 No alias HVA22-like protein (AHRD V3.3 *** K4CXW1_SOLLC) 0.03 Orthogroups_2024-Update
Solyc11g010930 No alias HVA22-like protein (AHRD V3.3 *** M1BBW7_SOLTU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 24 99
No external refs found!