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  5. GRMZM2G376918

GRMZM2G376918


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0008601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G376918
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Potri.016G038400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 225 258
IPR002885 Pentatricopeptide_repeat 388 436
IPR002885 Pentatricopeptide_repeat 287 334
IPR002885 Pentatricopeptide_repeat 72 96
IPR002885 Pentatricopeptide_repeat 135 161
IPR002885 Pentatricopeptide_repeat 463 485
IPR002885 Pentatricopeptide_repeat 167 195
IPR002885 Pentatricopeptide_repeat 104 134
IPR002885 Pentatricopeptide_repeat 530 559
No external refs found!