GRMZM2G379005

Description : GATA transcription factor 12

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G379005
Cluster	HCCA clusters: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15701	No alias	gata transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_19992	No alias	gata transcription factor 5	0.04	Orthogroups_2024-Update
At2g45050	No alias	GATA transcription factor 2...	0.03	Orthogroups_2024-Update
At3g16870	No alias	Uncharacterized protein At3g16870...	0.03	Orthogroups_2024-Update
At4g26150	No alias	Putative GATA transcription factor 22...	0.03	Orthogroups_2024-Update
Bradi2g62660	No alias	GATA transcription factor 17	0.02	Orthogroups_2024-Update
Bradi3g08240	No alias	GATA type zinc finger transcription factor family protein	0.03	Orthogroups_2024-Update
Bradi3g33200	No alias	GATA transcription factor 4	0.02	Orthogroups_2024-Update
Bradi4g41570	No alias	GATA transcription factor 9	0.03	Orthogroups_2024-Update
Brara.C03804.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.C04334.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.G01891.1	No alias	transcription factor *(A/B-GATA)	0.05	Orthogroups_2024-Update
GRMZM2G031983	No alias	GATA type zinc finger transcription factor family protein	0.03	Orthogroups_2024-Update
GRMZM2G054615	No alias	GATA transcription factor 5	0.02	Orthogroups_2024-Update
Glyma.02G056600	No alias	GATA type zinc finger transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.08G187300	No alias	GATA transcription factor 29	0.03	Orthogroups_2024-Update
Glyma.17G192800	No alias	GATA transcription factor 12	0.03	Orthogroups_2024-Update
LOC_Os02g56250	No alias	GATA zinc finger domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os10g40810	No alias	GATA zinc finger domain containing protein, expressed	0.04	Orthogroups_2024-Update
MA_103421g0030	No alias	(at5g66320 : 154.0) Encodes GATA transcription factor...	0.05	Orthogroups_2024-Update
MA_10434815g0010	No alias	(at2g45050 : 142.0) Encodes a member of the GATA factor...	0.02	Orthogroups_2024-Update
PSME_00046739-RA	No alias	(at2g45050 : 155.0) Encodes a member of the GATA factor...	0.03	Orthogroups_2024-Update
Potri.001G188500	No alias	GATA transcription factor 9	0.04	Orthogroups_2024-Update
Potri.013G059600	No alias	GATA transcription factor 12	0.03	Orthogroups_2024-Update
Seita.1G252900.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Seita.1G358400.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Seita.9G325200.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Sobic.004G094100.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Sobic.004G337500.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Sobic.008G179800.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
Solyc01g090760	No alias	GATA transcription factor (AHRD V3.3 *** K4AZ17_SOLLC)	0.03	Orthogroups_2024-Update
Solyc09g075610	No alias	GATA transcription factor, putative (AHRD V3.3 *** B9RNI7_RICCO)	0.02	Orthogroups_2024-Update
Sopen02g029260	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
BP	GO:0015994	chlorophyll metabolic process	IEP	Predicted GO
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
BP	GO:0046148	pigment biosynthetic process	IEP	Predicted GO
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	322	355

External Links

No external refs found!

GRMZM2G379005

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation