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  5. GRMZM2G379964

GRMZM2G379964


Description : AAA-type ATPase family protein


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G379964
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62731 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
Bradi3g59247 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Glyma.05G047400 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
Glyma.06G171000 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update
Glyma.11G101600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Glyma.16G173700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
HORVU2Hr1G019730.16 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU4Hr1G033300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00055_0110 kfl00055_0110_v1.1 (at4g02480 : 607.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Kfl00238_0170 kfl00238_0170_v1.1 (at1g02890 : 595.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
MA_93384g0010 No alias (at4g02480 : 1067.0) AAA-type ATPase family protein;... 0.03 Orthogroups_2024-Update
Mp5g19800.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
PSME_00006163-RA No alias (at4g02480 : 1157.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
Potri.015G094100 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
Sobic.005G207500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!