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GRMZM2G382569


Description : senescence-related gene 1


Gene families : OG_42_0000290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G382569
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g70930 No alias leucoanthocyanidin dioxygenase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G382400 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update
Sobic.001G299200.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Sobic.001G542600.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.002G087800.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
Solyc02g071380 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 216 279
IPR026992 DIOX_N 58 166
No external refs found!