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  5. GRMZM2G389645

GRMZM2G389645


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000934 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G389645
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
At1g71060 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.03 Orthogroups_2024-Update
Bradi1g07850 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g13480 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G125900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
MA_881199g0010 No alias (at1g77360 : 416.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Potri.003G045800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G276600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G081300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen05g004160 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 312 359
IPR002885 Pentatricopeptide_repeat 242 288
IPR002885 Pentatricopeptide_repeat 381 430
IPR002885 Pentatricopeptide_repeat 174 218
IPR002885 Pentatricopeptide_repeat 142 171
No external refs found!