1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g034120

Solyc03g034120


Description : Homeobox-leucine zipper family protein (AHRD V3.3 *** B9MXR7_POPTR)


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g034120
Cluster HCCA clusters: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
81609 No alias homeobox protein 16 0.02 Orthogroups_2024-Update
A4A49_24322 No alias homeobox-leucine zipper protein athb-13 0.02 Orthogroups_2024-Update
GRMZM2G132367 No alias homeobox protein 6 0.02 Orthogroups_2024-Update
Kfl00088_0250 kfl00088_0250_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Kfl00862_0040 kfl00862_0040_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
LOC_Os09g29460 No alias homeobox associated leucine zipper, putative, expressed 0.02 Orthogroups_2024-Update
Potri.007G135100 No alias homeobox protein 52 0.03 Orthogroups_2024-Update
Solyc02g077590 No alias Homeobox-leucine zipper protein family (AHRD V3.3 *-*... 0.05 Orthogroups_2024-Update
Solyc03g113270 No alias LEVAHOX1G L.esculentum homeobox 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 55 110
No external refs found!